diff --git a/electron-builder.yml b/electron-builder.yml
index 89c99edec2..2fb5a45c71 100644
--- a/electron-builder.yml
+++ b/electron-builder.yml
@@ -77,6 +77,8 @@ linux:
   desktop:
     entry:
       StartupWMClass: CherryStudio
+  mimeTypes:
+    - x-scheme-handler/cherrystudio
 publish:
   provider: generic
   url: https://releases.cherry-ai.com
diff --git a/src/main/index.ts b/src/main/index.ts
index b1d161ead3..dda49b782e 100644
--- a/src/main/index.ts
+++ b/src/main/index.ts
@@ -8,7 +8,12 @@ import Logger from 'electron-log'
 import { registerIpc } from './ipc'
 import { configManager } from './services/ConfigManager'
 import mcpService from './services/MCPService'
-import { CHERRY_STUDIO_PROTOCOL, handleProtocolUrl, registerProtocolClient } from './services/ProtocolClient'
+import {
+  CHERRY_STUDIO_PROTOCOL,
+  handleProtocolUrl,
+  registerProtocolClient,
+  setupAppImageDeepLink
+} from './services/ProtocolClient'
 import { registerShortcuts } from './services/ShortcutService'
 import { TrayService } from './services/TrayService'
 import { windowService } from './services/WindowService'
@@ -53,6 +58,9 @@ if (!app.requestSingleInstanceLock()) {
 
     setAppDataDir()
 
+    // Setup deep link for AppImage on Linux
+    await setupAppImageDeepLink()
+
     if (process.env.NODE_ENV === 'development') {
       installExtension([REDUX_DEVTOOLS, REACT_DEVELOPER_TOOLS])
         .then((name) => console.log(`Added Extension:  ${name}`))
diff --git a/src/main/services/ProtocolClient.ts b/src/main/services/ProtocolClient.ts
index 84a8c007c5..1d98f31c92 100644
--- a/src/main/services/ProtocolClient.ts
+++ b/src/main/services/ProtocolClient.ts
@@ -1,3 +1,11 @@
+import { exec } from 'node:child_process'
+import fs from 'node:fs/promises'
+import path from 'node:path'
+import { promisify } from 'node:util'
+
+import { app } from 'electron'
+import Logger from 'electron-log'
+
 import { handleMcpProtocolUrl } from './urlschema/mcp-install'
 import { windowService } from './WindowService'
 
@@ -39,3 +47,78 @@ export function handleProtocolUrl(url: string) {
     })
   }
 }
+
+const execAsync = promisify(exec)
+
+const DESKTOP_FILE_NAME = 'cherrystudio-url-handler.desktop'
+
+/**
+ * Sets up deep linking for the AppImage build on Linux by creating a .desktop file.
+ * This allows the OS to open cherrystudio:// URLs with this App.
+ */
+export async function setupAppImageDeepLink(): Promise<void> {
+  // Only run on Linux and when packaged as an AppImage
+  if (process.platform !== 'linux' || !process.env.APPIMAGE) {
+    return
+  }
+
+  Logger.info('AppImage environment detected on Linux, setting up deep link.')
+
+  try {
+    const appPath = app.getPath('exe')
+    if (!appPath) {
+      Logger.error('Could not determine App path.')
+      return
+    }
+
+    const homeDir = app.getPath('home')
+    const applicationsDir = path.join(homeDir, '.local', 'share', 'applications')
+    const desktopFilePath = path.join(applicationsDir, DESKTOP_FILE_NAME)
+
+    // Ensure the applications directory exists
+    await fs.mkdir(applicationsDir, { recursive: true })
+
+    // Content of the .desktop file
+    // %U allows passing the URL to the application
+    // NoDisplay=true hides it from the regular application menu
+    const desktopFileContent = `[Desktop Entry]
+Name=Cherry Studio
+Exec=${escapePathForExec(appPath)} %U
+Terminal=false
+Type=Application
+MimeType=x-scheme-handler/${CHERRY_STUDIO_PROTOCOL};
+NoDisplay=true
+`
+
+    // Write the .desktop file (overwrite if exists)
+    await fs.writeFile(desktopFilePath, desktopFileContent, 'utf-8')
+    Logger.info(`Created/Updated desktop file: ${desktopFilePath}`)
+
+    // Update the desktop database
+    // It's important to update the database for the changes to take effect
+    try {
+      const { stdout, stderr } = await execAsync(`update-desktop-database ${escapePathForExec(applicationsDir)}`)
+      if (stderr) {
+        Logger.warn(`update-desktop-database stderr: ${stderr}`)
+      }
+      Logger.info(`update-desktop-database stdout: ${stdout}`)
+      Logger.info('Desktop database updated successfully.')
+    } catch (updateError) {
+      Logger.error('Failed to update desktop database:', updateError)
+      // Continue even if update fails, as the file is still created.
+    }
+  } catch (error) {
+    // Log the error but don't prevent the app from starting
+    Logger.error('Failed to setup AppImage deep link:', error)
+  }
+}
+
+/**
+ * Escapes a path for safe use within the Exec field of a .desktop file
+ * and for shell commands. Handles spaces and potentially other special characters
+ * by quoting.
+ */
+function escapePathForExec(filePath: string): string {
+  // Simple quoting for paths with spaces.
+  return `'${filePath.replace(/'/g, "'\\''")}'`
+}